STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48899.1COG0094 Ribosomal protein L5. (258 aa)    
Predicted Functional Partners:
EAQ49400.1
4Fe-4S ferredoxin, iron-sulfur binding; COG1145 Ferredoxin.
   
   0.832
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  0.733
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
  0.733
EAQ48887.1
COG0236 Acyl carrier protein.
  
  0.733
EAQ49360.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
  
 
   0.703
EAQ48156.1
COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
   0.614
EAQ50189.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
   0.614
EAQ50359.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
   0.614
EAQ49080.1
YhfK; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
   0.614
EAQ49237.1
Putative oxidoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
   0.614
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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