STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48907.1Hypothetical protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. (449 aa)    
Predicted Functional Partners:
secF
Putative protein-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.796
EAQ48906.1
Hypothetical protein.
       0.775
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.752
EAQ48443.1
Periplasmic protease; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
   
 0.606
EAQ51221.1
COG0753 Catalase.
   
 0.574
EAQ50546.1
Two-component system sensor histidine kinase/response regulator,hybrid ('one-component system'); COG0642 Signal transduction histidine kinase.
  
  
 0.562
EAQ49275.1
Two-component system sensor histidine kinase/response regulator,hybrid ('one-component system'); COG3292 Predicted periplasmic ligand-binding sensor domain.
  
  
 0.562
EAQ48869.1
Two-component system sensor histidine kinase/response regulator,hybrid ('one-component system'); COG3292 Predicted periplasmic ligand-binding sensor domain.
  
  
 0.562
EAQ48506.1
Two-component system sensor histidine kinase/response regulator hybrid; COG0642 Signal transduction histidine kinase.
  
  
 0.562
EAQ49827.1
COG2176 DNA polymerase III, alpha subunit (gram-positive type).
    
  0.548
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.