STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48909.1Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. (488 aa)    
Predicted Functional Partners:
EAQ48910.1
COG0067 Glutamate synthase domain 1.
 0.999
EAQ50583.1
COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family.
 0.997
EAQ48874.1
Adenylate/guanylate cyclase; COG0633 Ferredoxin.
    
 0.976
EAQ49715.1
Ferredoxin, 2Fe-2S; COG0633 Ferredoxin.
    
 0.972
EAQ48226.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.941
EAQ50258.1
COG0174 Glutamine synthetase.
  
 
 0.917
EAQ49206.1
Carbamoyl-phosphate synthase, large (or ammonia) subunit (carB); COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
  
 
 0.901
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.900
EAQ50185.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
     
 0.900
mdh
Putative malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 0.899
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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