STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48947.1Transporter, putative; COG3202 ATP/ADP translocase. (945 aa)    
Predicted Functional Partners:
EAQ48948.1
Hypothetical protein; COG2367 Beta-lactamase class A.
 
     0.949
EAQ48942.1
Phosphoenolpyruvate synthase (ppsA); COG1196 Chromosome segregation ATPases.
  
     0.775
EAQ48843.1
COG4529 Uncharacterized protein conserved in bacteria.
  
     0.548
EAQ49360.1
Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; COG0666 FOG: Ankyrin repeat.
  
     0.525
EAQ47878.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.518
EAQ51081.1
Hypothetical protein.
  
     0.517
EAQ51080.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.504
EAQ50106.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.503
EAQ48949.1
Hypothetical protein; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.457
EAQ48235.1
Hypothetical protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
  
     0.437
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.