STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48955.1COG1300 Uncharacterized membrane protein. (329 aa)    
Predicted Functional Partners:
EAQ48958.1
Hypothetical protein.
     0.970
EAQ48957.1
Hypothetical protein.
 
     0.958
EAQ48960.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.952
EAQ48956.1
Hypothetical protein; COG2252 Permeases.
 
     0.950
EAQ48954.1
Putative transmembrane protein; COG1714 Predicted membrane protein/domain.
 
    0.922
EAQ48959.1
Putative methanol denhydrogenase-related protein; COG0714 MoxR-like ATPases.
 
    0.836
EAQ48953.1
yadS protein; COG2860 Predicted membrane protein.
       0.565
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.486
EAQ48952.1
Hypothetical protein; COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase.
       0.430
EAQ48164.1
Putative outer membrane protein; COG2373 Large extracellular alpha-helical protein.
  
    0.416
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.