STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48990.1CAAX prenyl protease 1, putative; COG0501 Zn-dependent protease with chaperone function. (410 aa)    
Predicted Functional Partners:
EAQ48989.1
COG0566 rRNA methylases.
       0.802
EAQ48985.1
COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
     0.698
EAQ48988.1
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
       0.664
EAQ48991.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.613
EAQ48986.1
Hypothetical protein.
       0.588
EAQ48987.1
Hypothetical protein.
       0.588
EAQ50508.1
COG2020 Putative protein-S-isoprenylcysteine methyltransferase.
    
 0.574
EAQ51400.1
Heat shock protein DnaJ-like; COG1076 DnaJ-domain-containing proteins 1.
 
 
 0.561
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.553
EAQ48992.1
Putative iron storage-related regulatory protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
       0.551
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.