STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49501.1Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport. (1043 aa)    
Predicted Functional Partners:
EAQ49500.1
Putative outer membrane protein probably involved in nutrient binding.
 
 
   0.959
EAQ49497.1
Putative endo-arabinase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.885
EAQ50548.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.836
EAQ49499.1
Rhs family protein.
 
     0.792
EAQ49494.1
COG3533 Uncharacterized protein conserved in bacteria.
 
     0.770
EAQ49498.1
alpha-L-arabinosidase; COG3534 Alpha-L-arabinofuranosidase.
       0.746
EAQ50142.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.745
EAQ49495.1
Hypothetical protein; COG3507 Beta-xylosidase.
       0.740
EAQ49496.1
Endo-1,4-beta-xylanase D precursor; COG1621 Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 43 family.
       0.740
EAQ49057.1
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.687
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.