STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49533.1DPS family protein; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family. (163 aa)    
Predicted Functional Partners:
EAQ50249.1
Hypothetical protein; Belongs to the ClpS family.
   
 
 0.827
EAQ49534.1
Putative mechanosensitive channel protein (MscS family protein); COG0668 Small-conductance mechanosensitive channel.
 
     0.730
EAQ49535.1
Hypothetical protein.
       0.659
EAQ49530.1
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.489
EAQ49531.1
UDP-glucose/GDP-mannose dehydrogenase family protein; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.489
EAQ49532.1
NAD dependent epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
       0.489
EAQ49484.1
COG0380 Trehalose-6-phosphate synthase.
   
  
 0.475
EAQ49536.1
Hypothetical protein; COG1357 Uncharacterized low-complexity proteins.
       0.475
EAQ48714.1
COG1544 Ribosome-associated protein Y (PSrp-1).
   
    0.455
EAQ50680.1
Putative sigma(54) modulation protein; COG1544 Ribosome-associated protein Y (PSrp-1).
   
    0.455
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.