STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49540.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (790 aa)    
Predicted Functional Partners:
EAQ50314.1
COG0642 Signal transduction histidine kinase.
   
 0.945
EAQ49151.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
 0.924
EAQ49817.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0784 FOG: CheY-like receiver.
   
 0.850
EAQ49102.1
COG2202 FOG: PAS/PAC domain.
   
 0.850
EAQ49132.1
COG2202 FOG: PAS/PAC domain.
   
 0.850
EAQ49539.1
Hypothetical protein; COG1418 Predicted HD superfamily hydrolase.
 
     0.789
EAQ49538.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
     0.786
EAQ48463.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
     0.778
ribB
Putative riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.772
EAQ49241.1
Hypothetical protein; COG2831 Hemolysin activation/secretion protein.
 
     0.771
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.