STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49543.1Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1030 aa)    
Predicted Functional Partners:
EAQ49542.1
Hypothetical protein.
     0.945
EAQ50277.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.821
EAQ48130.1
Hypothetical protein.
     0.732
EAQ50276.1
Putative lipoprotein; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.709
EAQ50275.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.704
EAQ50273.1
Hypothetical protein.
  
     0.697
EAQ50626.1
Hypothetical protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
     0.693
EAQ48406.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.671
EAQ50279.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.670
EAQ50544.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.666
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.