STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ49659.1Putative cation symporter; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (481 aa)    
Predicted Functional Partners:
EAQ50314.1
COG0642 Signal transduction histidine kinase.
   
 
 0.798
EAQ48643.1
CpmD protein involved in carbapenem biosynthesis; COG0506 Proline dehydrogenase.
 
  
 0.680
EAQ49817.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0784 FOG: CheY-like receiver.
   
 
 0.584
EAQ49102.1
COG2202 FOG: PAS/PAC domain.
   
 
 0.584
EAQ49132.1
COG2202 FOG: PAS/PAC domain.
   
 
 0.584
EAQ49657.1
COG0671 Membrane-associated phospholipid phosphatase.
  
    0.506
EAQ48057.1
Putative sigma-54 dependent transcriptional regulator; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain.
    
  0.505
EAQ49656.1
3-beta hydroxysteroid dehydrogenase/isomerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
       0.497
EAQ49658.1
Hypothetical protein.
       0.497
EAQ51239.1
Hypothetical protein; COG0495 Leucyl-tRNA synthetase.
  
     0.495
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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