Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ49671.1 | EAQ49673.1 | MED217_12469 | MED217_12479 | GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain. | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | 0.515 |
| EAQ49671.1 | EAQ49674.1 | MED217_12469 | MED217_12484 | GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain. | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 0.472 |
| EAQ49671.1 | sbcD | MED217_12469 | MED217_12474 | GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.515 |
| EAQ49673.1 | EAQ49671.1 | MED217_12479 | MED217_12469 | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain. | 0.515 |
| EAQ49673.1 | EAQ49674.1 | MED217_12479 | MED217_12484 | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 0.701 |
| EAQ49673.1 | EAQ49675.1 | MED217_12479 | MED217_12489 | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | 4-hydroxybenzoyl-CoA thioesterase domain protein; COG1607 Acyl-CoA hydrolase. | 0.424 |
| EAQ49673.1 | sbcD | MED217_12479 | MED217_12474 | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.997 |
| EAQ49674.1 | EAQ49671.1 | MED217_12484 | MED217_12469 | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain. | 0.472 |
| EAQ49674.1 | EAQ49673.1 | MED217_12484 | MED217_12479 | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | 0.701 |
| EAQ49674.1 | EAQ49675.1 | MED217_12484 | MED217_12489 | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 4-hydroxybenzoyl-CoA thioesterase domain protein; COG1607 Acyl-CoA hydrolase. | 0.461 |
| EAQ49674.1 | sbcD | MED217_12484 | MED217_12474 | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.701 |
| EAQ49675.1 | EAQ49673.1 | MED217_12489 | MED217_12479 | 4-hydroxybenzoyl-CoA thioesterase domain protein; COG1607 Acyl-CoA hydrolase. | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | 0.424 |
| EAQ49675.1 | EAQ49674.1 | MED217_12489 | MED217_12484 | 4-hydroxybenzoyl-CoA thioesterase domain protein; COG1607 Acyl-CoA hydrolase. | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 0.461 |
| EAQ49675.1 | sbcD | MED217_12489 | MED217_12474 | 4-hydroxybenzoyl-CoA thioesterase domain protein; COG1607 Acyl-CoA hydrolase. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.424 |
| sbcD | EAQ49671.1 | MED217_12474 | MED217_12469 | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain. | 0.515 |
| sbcD | EAQ49673.1 | MED217_12474 | MED217_12479 | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | ATP/GTP-binding site motif A (P-loop):ABC transporter; COG0419 ATPase involved in DNA repair. | 0.997 |
| sbcD | EAQ49674.1 | MED217_12474 | MED217_12484 | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. | 0.701 |
| sbcD | EAQ49675.1 | MED217_12474 | MED217_12489 | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 4-hydroxybenzoyl-CoA thioesterase domain protein; COG1607 Acyl-CoA hydrolase. | 0.424 |