STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48409.1Oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins. (454 aa)    
Predicted Functional Partners:
EAQ48079.1
COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.607
EAQ48410.1
Hypothetical protein.
  
    0.557
EAQ51067.1
COG0153 Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.500
EAQ49059.1
Putative alpha-rhamnosidase.
  
     0.494
EAQ48472.1
Glutaminase; COG0012 Predicted GTPase, probable translation factor.
  
     0.475
lysS-2
COG1190 Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.471
EAQ48213.1
Probable glyoxylate-induced protein; COG3622 Hydroxypyruvate isomerase.
  
    0.454
EAQ50051.1
Putative lipoprotein; COG3669 Alpha-L-fucosidase.
  
     0.437
EAQ48207.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
   
 
  0.430
EAQ48210.1
Hypothetical protein; COG3622 Hydroxypyruvate isomerase.
   
 
  0.430
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.