STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48478.1Putative xylosidase/arabinosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (324 aa)    
Predicted Functional Partners:
EAQ48522.1
COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.919
EAQ49493.1
COG3534 Alpha-L-arabinofuranosidase.
 
  
  0.888
EAQ48735.1
Putative beta-xylosidase; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
     0.819
EAQ48479.1
COG3533 Uncharacterized protein conserved in bacteria.
 
     0.813
EAQ49778.1
Putative lipoprotein; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.747
EAQ48542.1
Hypothetical protein; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.728
EAQ48480.1
COG3537 Putative alpha-1,2-mannosidase.
     0.687
uxaC
COG1904 Glucuronate isomerase.
     
 0.627
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
   
 
  0.625
EAQ49797.1
Endo-1,4-beta-xylanase D precursor; COG3507 Beta-xylosidase.
  
  
 
0.622
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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