STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48488.1Putative ATP/GTP-binding protein; COG3291 FOG: PKD repeat. (266 aa)    
Predicted Functional Partners:
EAQ48480.1
COG3537 Putative alpha-1,2-mannosidase.
 
     0.947
EAQ48486.1
Alpha-1,2-mannosidase family protein; COG3537 Putative alpha-1,2-mannosidase.
     0.945
EAQ48481.1
Putative sugar hydrolase; COG3537 Putative alpha-1,2-mannosidase.
 
     0.941
EAQ50040.1
COG3537 Putative alpha-1,2-mannosidase.
 
     0.936
EAQ48489.1
Putative outer membrane protein, probably involved in nutrient binding.
       0.768
EAQ48470.1
Hypothetical protein.
 
     0.750
EAQ50046.1
Hypothetical protein; COG3537 Putative alpha-1,2-mannosidase.
 
     0.658
EAQ48490.1
Putative outer membrane protein, probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein.
       0.616
EAQ48469.1
Hypothetical protein.
  
     0.591
EAQ50498.1
COG1538 Outer membrane protein.
  
     0.522
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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