STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48516.1Hypothetical protein; COG1457 Purine-cytosine permease and related proteins. (475 aa)    
Predicted Functional Partners:
EAQ48514.1
Hypothetical protein; COG1070 Sugar (pentulose and hexulose) kinases.
 
     0.944
EAQ48513.1
Hypothetical protein; COG4952 Predicted sugar isomerase.
 
     0.855
EAQ48511.1
COG1725 Predicted transcriptional regulators.
 
     0.805
EAQ48515.1
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
       0.785
EAQ48512.1
Hypothetical protein.
 
     0.750
EAQ48766.1
Hypothetical protein; COG0679 Predicted permeases.
  
     0.644
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.620
EAQ49206.1
Carbamoyl-phosphate synthase, large (or ammonia) subunit (carB); COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
   
    0.555
EAQ49794.1
SusD, outer membrane protein.
  
     0.550
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
   
    0.529
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.