STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48520.1Hypothetical protein; COG3408 Glycogen debranching enzyme. (1215 aa)    
Predicted Functional Partners:
EAQ48521.1
Hypothetical protein.
 
 
  0.955
EAQ48519.1
YesW.
 
     0.910
EAQ48517.1
exo-poly-alpha-D-galacturonosidase precursor; COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
     0.905
EAQ48518.1
Hypothetical protein.
 
     0.853
EAQ48509.1
Putative rhamnogalacturonan acetylesterase; COG2755 Lysophospholipase L1 and related esterases.
 
    0.814
EAQ48507.1
Putative rhamnogalacturonan acetylesterase; COG2755 Lysophospholipase L1 and related esterases.
 
    0.801
EAQ50279.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.773
EAQ50273.1
Hypothetical protein.
  
     0.772
EAQ50275.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.770
EAQ50276.1
Putative lipoprotein; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.768
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.