STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ48523.1Endo-1,4-beta-xylanase B; COG0657 Esterase/lipase. (314 aa)    
Predicted Functional Partners:
EAQ48522.1
COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     0.956
EAQ48482.1
Putative acylhydrolase; COG2755 Lysophospholipase L1 and related esterases.
 
      0.840
EAQ48524.1
COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
   0.834
EAQ49400.1
4Fe-4S ferredoxin, iron-sulfur binding; COG1145 Ferredoxin.
   
   0.768
EAQ48525.1
Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
       0.768
EAQ48526.1
Hypothetical protein.
 
     0.758
EAQ50295.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
     0.701
EAQ48510.1
Sialic acid-specific 9-O-acetylesterase.
 
     0.615
EAQ49643.1
COG4303 Ethanolamine ammonia-lyase, large subunit.
  
  
  0.602
EAQ50712.1
O-succinylbenzoic acid--CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.549
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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