STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47941.1Hypothetical protein. (361 aa)    
Predicted Functional Partners:
EAQ47940.1
Glycosyltransferase-like; COG0438 Glycosyltransferase.
  
    0.783
EAQ47942.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
    0.783
EAQ47939.1
Putative dNTP-hexose dehydratase-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
    0.781
EAQ47943.1
RfbQ; COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.773
EAQ47938.1
Glycosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
    0.613
EAQ47944.1
Putative polysaccharide polymerase; COG0477 Permeases of the major facilitator superfamily.
  
    0.603
EAQ47936.1
Tyrosine-protein kinase ptk; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.470
EAQ47937.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
    0.449
EAQ47945.1
GumI protein; COG0438 Glycosyltransferase.
  
    0.421
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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