STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47963.1Thioredoxin-related transmembrane protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (150 aa)    
Predicted Functional Partners:
EAQ47962.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.875
EAQ49774.1
Cytochrome c biogenesis (thioredoxin); COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.694
EAQ48930.1
Hypothetical protein; COG1113 Gamma-aminobutyrate permease and related permeases.
    
 0.679
EAQ50491.1
Antioxidant, AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
   
  0.609
EAQ49115.1
Putative thioredoxin peroxidase; COG0450 Peroxiredoxin.
   
  0.609
EAQ51465.1
Rehydrin; COG0450 Peroxiredoxin.
   
  0.609
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.597
EAQ51386.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
  
   0.594
EAQ47961.1
Rhodanese domain protein; COG0607 Rhodanese-related sulfurtransferase.
       0.592
EAQ51124.1
YpmQ; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
  
   0.577
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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