STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50687.1Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (317 aa)    
Predicted Functional Partners:
EAQ50061.1
K+ uptake transporter, KtrB subunit; COG0168 Trk-type K+ transport systems, membrane components.
  
 
 0.704
EAQ50328.1
Putative potassium uptake protein; COG0168 Trk-type K+ transport systems, membrane components.
  
 
 0.704
EAQ50688.1
Hypothetical protein; COG1983 Putative stress-responsive transcriptional regulator.
       0.690
EAQ50581.1
Hypothetical protein.
 
     0.656
EAQ49522.1
Competence-damage inducible protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
 
  
 0.648
EAQ50686.1
Putative Na(+)-linked D-alanine glycine permease; COG1115 Na+/alanine symporter.
       0.563
EAQ50689.1
COG0080 Ribosomal protein L11.
       0.560
EAQ48621.1
COG0314 Molybdopterin converting factor, large subunit.
   
    0.512
EAQ50684.1
COG1555 DNA uptake protein and related DNA-binding proteins.
       0.444
EAQ51450.1
DNA methylase, putative; COG2852 Uncharacterized protein conserved in bacteria.
  
    0.427
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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