STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50689.1COG0080 Ribosomal protein L11. (428 aa)    
Predicted Functional Partners:
EAQ50688.1
Hypothetical protein; COG1983 Putative stress-responsive transcriptional regulator.
       0.685
EAQ50684.1
COG1555 DNA uptake protein and related DNA-binding proteins.
 
     0.665
EAQ50687.1
Potassium channel protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.560
EAQ50690.1
Hypothetical protein.
       0.549
EAQ51481.1
Smf protein DNA processing chain A; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
     0.512
EAQ48996.1
Hypothetical protein.
  
     0.453
EAQ50389.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
  
     0.446
lspA-2
Putative signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
     0.441
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.