STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50844.1Hypothetical protein; COG4783 Putative Zn-dependent protease, contains TPR repeats. (254 aa)    
Predicted Functional Partners:
EAQ50842.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.746
EAQ50843.1
Hypothetical protein; COG1876 D-alanyl-D-alanine carboxypeptidase.
       0.746
EAQ50841.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
       0.721
ribB
Putative riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.664
EAQ51485.1
Putative peptidase; COG4942 Membrane-bound metallopeptidase.
   
   0.615
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.548
EAQ50846.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.509
EAQ50840.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.504
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.