STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50864.1COG3666 Transposase and inactivated derivatives. (142 aa)    
Predicted Functional Partners:
EAQ50861.1
COG3666 Transposase and inactivated derivatives.
 
     0.773
EAQ49594.1
COG3666 Transposase and inactivated derivatives.
 
     0.766
EAQ50974.1
COG3666 Transposase and inactivated derivatives.
 
     0.760
EAQ50863.1
Transposase ORF-A, IS-type; COG2801 Transposase and inactivated derivatives.
       0.529
EAQ50460.1
Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family.
  
     0.455
EAQ49525.1
Hypothetical protein.
  
     0.425
EAQ50498.1
COG1538 Outer membrane protein.
  
     0.424
EAQ50459.1
Hypothetical protein; COG0210 Superfamily I DNA and RNA helicases.
  
    0.413
EAQ50862.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
       0.401
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.