STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ50936.1Aspartate aminotransferase; COG0750 Predicted membrane-associated Zn-dependent proteases 1. (450 aa)    
Predicted Functional Partners:
EAQ48822.1
TPR repeat protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 0.687
EAQ50937.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
       0.594
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.594
EAQ49535.1
Hypothetical protein.
  
   0.535
EAQ49891.1
Aspartokinase I/homoserine dehydrogenase, threonine-sensitive; COG2021 Homoserine acetyltransferase.
    
  0.521
EAQ50142.1
Putative outer membrane protein, probably involved in nutrient binding.
  
   0.521
EAQ51245.1
Putative ORF1 (plasmid); COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.513
EAQ49408.1
Putative aspartokinase I-homoserine dehydrogenase; COG0527 Aspartokinases.
     
  0.499
EAQ51328.1
Aspartate kinase III; COG0527 Aspartokinases; Belongs to the aspartokinase family.
     
  0.499
EAQ51361.1
COG0527 Aspartokinases; Belongs to the aspartokinase family.
     
  0.499
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.