STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51048.1COG0077 Prephenate dehydratase. (274 aa)    
Predicted Functional Partners:
EAQ51045.1
Putative chorismate mutase; COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
 
 0.998
EAQ50331.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 
 
 0.988
EAQ51046.1
COG0287 Prephenate dehydrogenase.
 
 
 0.986
EAQ50937.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 
 
 0.938
hisC
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.913
EAQ51047.1
Putative aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 
 0.904
EAQ48765.1
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
  
 
 0.901
EAQ50126.1
Phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase); COG3186 Phenylalanine-4-hydroxylase.
     
 0.883
EAQ50062.1
Decarboxylase, pyridoxal-dependent; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
     
 0.881
EAQ48363.1
2-dehydro-3-deoxyphosphooctonate aldolase; COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Belongs to the KdsA family.
 
 
  
 0.877
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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