STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51130.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EAQ51131.1
Hypothetical protein.
       0.768
EAQ51132.1
TonB; COG2217 Cation transport ATPase.
       0.562
EAQ49714.1
Hypothetical protein; COG3622 Hydroxypyruvate isomerase.
  
     0.497
EAQ48206.1
Probable secreted glycosyl hydrolase.
  
     0.492
EAQ50076.1
Putative outer membrane protein.
  
     0.486
EAQ48205.1
Putative multi-domain protein.
  
     0.482
EAQ50431.1
Hypothetical protein; COG1064 Zn-dependent alcohol dehydrogenases.
  
     0.460
EAQ51128.1
Hypothetical protein; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
       0.449
ctaB
Cytochrome c oxidase assembly factor (CtaA) + protoheme IXfarnesyltransferase (CtaB); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.449
EAQ50072.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.