STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51166.1MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins. (263 aa)    
Predicted Functional Partners:
EAQ51168.1
Hypothetical protein.
 
 
 0.985
EAQ51169.1
Putative membrane protein; COG0848 Biopolymer transport protein.
 
 
 0.983
EAQ48778.1
Hypothetical protein.
 
 
 0.950
EAQ51058.1
Putative tansport related protein; COG0848 Biopolymer transport protein.
 
 
 0.909
EAQ51132.1
TonB; COG2217 Cation transport ATPase.
 
 
 0.802
EAQ47837.1
Hypothetical protein.
  
     0.732
EAQ51133.1
TonB.
  
     0.713
EAQ51167.1
Hypothetical protein; COG0833 Amino acid transporters.
       0.712
EAQ48020.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.682
EAQ49011.1
Hypothetical protein.
  
     0.674
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.