STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51171.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
EAQ51172.1
COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
       0.821
EAQ50712.1
O-succinylbenzoic acid--CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.703
EAQ49200.1
Hypothetical protein.
  
     0.694
EAQ51141.1
Hypothetical protein; COG2124 Cytochrome P450.
    
  0.688
EAQ49523.1
Hypothetical protein; COG2198 FOG: HPt domain.
  
     0.679
EAQ48350.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.669
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.659
EAQ47822.1
Hypothetical protein; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
     0.653
EAQ50221.1
Putative hemin receptor; COG5651 PPE-repeat proteins.
  
     0.649
EAQ48183.1
Hypothetical protein.
  
     0.617
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.