STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51180.1Putative integral membrane protein; COG1033 Predicted exporters of the RND superfamily. (803 aa)    
Predicted Functional Partners:
asnS
COG0017 Aspartyl/asparaginyl-tRNA synthetases.
       0.565
EAQ51181.1
Hypothetical protein.
       0.550
EAQ49109.1
Hypothetical protein.
 
  
 0.500
EAQ51318.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.464
pheS
phenylalanyl-tRNA synthetase alpha subunit; COG1286 Uncharacterized membrane protein, required for colicin V production.
 
     0.454
EAQ49309.1
Putative oxidoreductase; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
 
  
 0.450
EAQ48081.1
Lipoprotein, putative.
  
     0.446
frr
Ribosome releasing factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.442
EAQ51209.1
COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.424
EAQ50582.1
Hypothetical protein; COG2200 FOG: EAL domain.
  
     0.409
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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