STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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EAQ51205.1Putative isoprenoid biosynthesis related protein; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (324 aa)    
Predicted Functional Partners:
EAQ48011.1
Putative isopentenyl-diphosphate delta-isomerase; COG1443 Isopentenyldiphosphate isomerase.
 
 
 0.974
EAQ51106.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.973
EAQ49506.1
COG1562 Phytoene/squalene synthetase.
  
 0.944
EAQ50080.1
COG3407 Mevalonate pyrophosphate decarboxylase.
  
 0.922
EAQ51034.1
Polyprenyl synthetase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.911
EAQ51204.1
Hypothetical protein; COG2896 Molybdenum cofactor biosynthesis enzyme.
       0.798
cmk
COG0283 Cytidylate kinase.
 
 
  0.701
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.684
EAQ48925.1
Phosphoglucomutase/phosphomannomutase; COG1109 Phosphomannomutase.
 
   
 0.678
EAQ48092.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
   
 0.605
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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