STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51269.1Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component. (481 aa)    
Predicted Functional Partners:
EAQ51268.1
ABC transporter, ATP-binding protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
 0.999
EAQ51265.1
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.992
EAQ51262.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
   
 0.955
EAQ51266.1
FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
   
0.917
EAQ51270.1
Scaffold protein for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
 
 0.878
EAQ51263.1
COG2166 SufE protein probably involved in Fe-S center assembly.
 
   0.825
EAQ51355.1
Hypothetical protein; COG0520 Selenocysteine lyase.
 
 
 0.759
EAQ49859.1
COG0520 Selenocysteine lyase.
  
 
 0.643
EAQ51267.1
Hypothetical protein.
       0.548
thiL
Putative thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.432
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.