STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51336.1Metallophosphoesterase; COG1407 Predicted ICC-like phosphoesterases. (211 aa)    
Predicted Functional Partners:
EAQ51334.1
Helicase domain protein; COG1201 Lhr-like helicases.
 
    0.886
EAQ51332.1
DNA ligase; COG1793 ATP-dependent DNA ligase.
 
   
 0.849
EAQ51331.1
Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
 
     0.847
EAQ51337.1
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
       0.786
EAQ51335.1
COG2764 Uncharacterized protein conserved in bacteria.
       0.520
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.