STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51373.1ISPsy11, transposase OrfB; COG2801 Transposase and inactivated derivatives. (273 aa)    
Predicted Functional Partners:
EAQ51372.1
COG2963 Transposase and inactivated derivatives.
    0.926
EAQ49831.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ50300.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ50396.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ48752.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ49351.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ49398.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ51417.1
COG2963 Transposase and inactivated derivatives.
 
    0.757
EAQ51371.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
       0.443
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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