STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51385.1Membrane-associated zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1. (438 aa)    
Predicted Functional Partners:
EAQ51107.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
  
 0.699
EAQ48570.1
Signal peptidase I; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Belongs to the peptidase S26 family.
 
  
 0.695
EAQ51106.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.693
EAQ50322.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
  
 0.647
EAQ48910.1
COG0067 Glutamate synthase domain 1.
  
  
 0.579
EAQ51012.1
Putative cell division protein.
  
    0.570
EAQ48788.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.565
EAQ48041.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
  
 0.564
EAQ49469.1
COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
     0.547
EAQ50149.1
30S ribosomal protein S12; COG4775 Outer membrane protein/protective antigen OMA87.
  
  
 0.529
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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