STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51407.1Putative amidophosphoribosyl-transferase; COG1040 Predicted amidophosphoribosyltransferases. (225 aa)    
Predicted Functional Partners:
EAQ51481.1
Smf protein DNA processing chain A; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
 
 0.908
EAQ48032.1
Competence protein; COG0658 Predicted membrane metal-binding protein.
 
  
 0.862
EAQ48842.1
Magnesium chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity.
 
  
 0.820
EAQ48121.1
COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
    0.751
EAQ51343.1
Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.
 
    0.703
EAQ51046.1
COG0287 Prephenate dehydrogenase.
   
  
 0.659
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.648
EAQ51406.1
Hypothetical protein.
       0.629
EAQ50773.1
ABC transporter, ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
   
    0.620
EAQ51408.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
       0.577
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.