STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51439.1C-5 cytosine-specific DNA methylase:Multi antimicrobial extrusion(MatE) protein; COG0534 Na+-driven multidrug efflux pump. (420 aa)    
Predicted Functional Partners:
EAQ49506.1
COG1562 Phytoene/squalene synthetase.
   
   0.575
EAQ51440.1
Hypothetical protein.
       0.572
EAQ51438.1
Hypothetical protein; COG4409 Neuraminidase (sialidase).
       0.536
EAQ49194.1
30S ribosomal protein S1; COG2183 Transcriptional accessory protein.
   
    0.510
EAQ50578.1
Cell volume regulation protein CvrA; COG4667 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.442
EAQ49983.1
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
  
    0.434
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.