STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ51500.1COG1664 Integral membrane protein CcmA involved in cell shape determination. (134 aa)    
Predicted Functional Partners:
EAQ51501.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
     0.844
EAQ51498.1
Hypothetical protein; COG0531 Amino acid transporters.
       0.788
EAQ51499.1
Hypothetical protein.
       0.788
EAQ50114.1
Putative peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
 
   
 0.680
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
       0.595
EAQ51496.1
Hypothetical protein.
       0.568
EAQ49839.1
Outer membrane assembly protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.540
EAQ51502.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.533
EAQ47835.1
Putative peptidase; COG4942 Membrane-bound metallopeptidase.
 
   
 0.526
EAQ48973.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.504
Your Current Organism:
Leeuwenhoekiella blandensis
NCBI taxonomy Id: 398720
Other names: Flavobacterium sp. MED217, L. blandensis MED217, Leeuwenhoekiella blandensis MED217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.