STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Glov_1496PFAM: glycosyl transferase group 1; KEGG: prw:PsycPRwf_0244 glycosyl transferase, group 1. (374 aa)    
Predicted Functional Partners:
Glov_1494
PFAM: glycosyl transferase group 1; KEGG: cvi:CV_4120 probable glycosyltransferase.
 
     0.848
Glov_1493
PFAM: glycosyl transferase group 1; KEGG: bfr:BF3914 putative glycosyltransferase.
 
     0.832
Glov_1495
KEGG: dsy:DSY3336 hypothetical protein.
  
  
 0.813
Glov_1492
PFAM: GCN5-related N-acetyltransferase; KEGG: afw:Anae109_1231 GCN5-related N-acetyltransferase.
     
 0.776
Glov_1490
KEGG: gme:Gmet_1312 NAD-dependent epimerase/dehydratase.
  
  
 0.734
gmd-2
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.725
Glov_1487
PFAM: sugar transferase; KEGG: cvi:CV_4117 probable glycosyltransferase.
 
  
 0.711
Glov_2745
PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1509 glycosyl transferase group 1.
  
     0.695
Glov_2923
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ppd:Ppro_2900 heavy metal translocating P-type ATPase.
  
  
 0.612
Glov_1142
Nucleotide sugar dehydrogenase; KEGG: ppd:Ppro_1022 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
 
  
 0.564
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.