STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1512820Lipase, putative. (599 aa)    
Predicted Functional Partners:
RCOM_0852460
Uncharacterized protein.
  
 
0.929
RCOM_1698390
Uncharacterized protein.
  
 
0.903
RCOM_1698400
Uncharacterized protein.
   
 
 0.890
RCOM_1513750
Isochorismate synthase, putative.
   
  
 0.619
RCOM_1047190
Regulatory protein NPR1, putative.
      
 0.609
RCOM_0665610
Protein CPR-5, putative.
  
   
 0.540
RCOM_1453370
DUF4220 domain-containing protein.
  
 
   0.538
RCOM_1590780
DUF4220 domain-containing protein.
  
 
   0.537
RCOM_1453620
DUF4220 domain-containing protein.
  
 
   0.537
RCOM_1381800
Protein PRY2, putative; Belongs to the CRISP family.
      
 0.524
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.