Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0017290 | RCOM_0794090 | B9SXL0 | B9SVM7 | Senescence-associated protein DIN1, putative. | Cysteine desulfuration protein sufE, putative. | 0.443 |
RCOM_0017290 | RCOM_1032820 | B9SXL0 | B9RJB1 | Senescence-associated protein DIN1, putative. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.736 |
RCOM_0017290 | RCOM_1506010 | B9SXL0 | B9RAF2 | Senescence-associated protein DIN1, putative. | Uncharacterized protein. | 0.554 |
RCOM_0017290 | RCOM_1510480 | B9SXL0 | B9RB15 | Senescence-associated protein DIN1, putative. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.830 |
RCOM_0017290 | RCOM_1574740 | B9SXL0 | B9RHZ9 | Senescence-associated protein DIN1, putative. | Sulfurtransferase. | 0.581 |
RCOM_0017290 | RCOM_1912480 | B9SXL0 | B9TDS2 | Senescence-associated protein DIN1, putative. | Thiosulfate sulfertansferase, putative. | 0.581 |
RCOM_0257150 | RCOM_0794090 | B9T968 | B9SVM7 | Protein sufD, putative. | Cysteine desulfuration protein sufE, putative. | 0.648 |
RCOM_0257150 | RCOM_0905060 | B9T968 | B9RXM8 | Protein sufD, putative. | Protein sufB, putative. | 0.527 |
RCOM_0257150 | RCOM_1506010 | B9T968 | B9RAF2 | Protein sufD, putative. | Uncharacterized protein. | 0.780 |
RCOM_0257150 | RCOM_1510480 | B9T968 | B9RB15 | Protein sufD, putative. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.972 |
RCOM_0327130 | RCOM_1032820 | B9TC98 | B9RJB1 | Xanthosine phosphorylase, putative. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.573 |
RCOM_0327130 | RCOM_1506010 | B9TC98 | B9RAF2 | Xanthosine phosphorylase, putative. | Uncharacterized protein. | 0.569 |
RCOM_0794090 | RCOM_0017290 | B9SVM7 | B9SXL0 | Cysteine desulfuration protein sufE, putative. | Senescence-associated protein DIN1, putative. | 0.443 |
RCOM_0794090 | RCOM_0257150 | B9SVM7 | B9T968 | Cysteine desulfuration protein sufE, putative. | Protein sufD, putative. | 0.648 |
RCOM_0794090 | RCOM_0905060 | B9SVM7 | B9RXM8 | Cysteine desulfuration protein sufE, putative. | Protein sufB, putative. | 0.661 |
RCOM_0794090 | RCOM_1506010 | B9SVM7 | B9RAF2 | Cysteine desulfuration protein sufE, putative. | Uncharacterized protein. | 0.909 |
RCOM_0794090 | RCOM_1510480 | B9SVM7 | B9RB15 | Cysteine desulfuration protein sufE, putative. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.882 |
RCOM_0794090 | RCOM_2116630 | B9SVM7 | B9T8S1 | Cysteine desulfuration protein sufE, putative. | Rhodanese domain-containing protein. | 0.443 |
RCOM_0905060 | RCOM_0257150 | B9RXM8 | B9T968 | Protein sufB, putative. | Protein sufD, putative. | 0.527 |
RCOM_0905060 | RCOM_0794090 | B9RXM8 | B9SVM7 | Protein sufB, putative. | Cysteine desulfuration protein sufE, putative. | 0.661 |
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