Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0498660 | RCOM_0963880 | B9SWP5 | B9RVK0 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | RNA polymerase sigma factor rpoD, putative. | 0.468 |
RCOM_0498660 | RCOM_1508020 | B9SWP5 | B9RAR0 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Protein-L-isoaspartate O-methyltransferase. | 0.590 |
RCOM_0498660 | RCOM_1517450 | B9SWP5 | B9SDF8 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | RNA polymerase sigma factor rpoD, putative. | 0.468 |
RCOM_0784670 | RCOM_1508020 | B9SB47 | B9RAR0 | 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative. | Protein-L-isoaspartate O-methyltransferase. | 0.656 |
RCOM_0819850 | RCOM_1508020 | B9SGS6 | B9RAR0 | Zinc finger protein, putative. | Protein-L-isoaspartate O-methyltransferase. | 0.526 |
RCOM_0937370 | RCOM_1508020 | B9RZA9 | B9RAR0 | Uncharacterized protein. | Protein-L-isoaspartate O-methyltransferase. | 0.531 |
RCOM_0963880 | RCOM_0498660 | B9RVK0 | B9SWP5 | RNA polymerase sigma factor rpoD, putative. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.468 |
RCOM_0963880 | RCOM_1508020 | B9RVK0 | B9RAR0 | RNA polymerase sigma factor rpoD, putative. | Protein-L-isoaspartate O-methyltransferase. | 0.581 |
RCOM_0963880 | RCOM_1896500 | B9RVK0 | B9TFB4 | RNA polymerase sigma factor rpoD, putative. | AB hydrolase-1 domain-containing protein. | 0.468 |
RCOM_1508020 | RCOM_0498660 | B9RAR0 | B9SWP5 | Protein-L-isoaspartate O-methyltransferase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.590 |
RCOM_1508020 | RCOM_0784670 | B9RAR0 | B9SB47 | Protein-L-isoaspartate O-methyltransferase. | 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative. | 0.656 |
RCOM_1508020 | RCOM_0819850 | B9RAR0 | B9SGS6 | Protein-L-isoaspartate O-methyltransferase. | Zinc finger protein, putative. | 0.526 |
RCOM_1508020 | RCOM_0937370 | B9RAR0 | B9RZA9 | Protein-L-isoaspartate O-methyltransferase. | Uncharacterized protein. | 0.531 |
RCOM_1508020 | RCOM_0963880 | B9RAR0 | B9RVK0 | Protein-L-isoaspartate O-methyltransferase. | RNA polymerase sigma factor rpoD, putative. | 0.581 |
RCOM_1508020 | RCOM_1517450 | B9RAR0 | B9SDF8 | Protein-L-isoaspartate O-methyltransferase. | RNA polymerase sigma factor rpoD, putative. | 0.581 |
RCOM_1508020 | RCOM_1594210 | B9RAR0 | B9R7T9 | Protein-L-isoaspartate O-methyltransferase. | Cytochrome P450, putative. | 0.548 |
RCOM_1508020 | RCOM_1594220 | B9RAR0 | B9R7U0 | Protein-L-isoaspartate O-methyltransferase. | Methyltransferase. | 0.548 |
RCOM_1508020 | RCOM_1896500 | B9RAR0 | B9TFB4 | Protein-L-isoaspartate O-methyltransferase. | AB hydrolase-1 domain-containing protein. | 0.590 |
RCOM_1508020 | RCOM_2045220 | B9RAR0 | B9TM04 | Protein-L-isoaspartate O-methyltransferase. | Uncharacterized protein. | 0.656 |
RCOM_1517450 | RCOM_0498660 | B9SDF8 | B9SWP5 | RNA polymerase sigma factor rpoD, putative. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.468 |
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