STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1612330Calmodulin, putative. (187 aa)    
Predicted Functional Partners:
RCOM_0613750
Calmodulin binding protein, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.638
RCOM_0884730
Peptidylprolyl isomerase.
   
 0.557
RCOM_1958220
Protein SNO4, putative.
   
 0.548
RCOM_0557530
ATP binding protein, putative.
   
 0.484
RCOM_0484360
Ankyrin repeat-containing protein, putative.
    
 0.433
RCOM_0371470
Uncharacterized protein.
    
 0.432
RCOM_0371480
DNA repair protein xp-C / rad4, putative.
    
 0.432
RCOM_1465980
Uncharacterized protein.
   
 0.405
RCOM_0205120
Uncharacterized protein.
   
 0.405
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.