STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1578930Ubiquitin-conjugating enzyme E2 C, putative; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)    
Predicted Functional Partners:
RCOM_1436820
Ring finger, putative.
   
 0.962
RCOM_1095800
Anaphase-promoting complex subunit, putative.
    
 0.958
RCOM_0837560
E3 ubiquitin ligase apc2, putative; Belongs to the cullin family.
    
 0.946
RCOM_1123640
ANAPC5 domain-containing protein.
    
 0.937
RCOM_0535960
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.933
RCOM_1374500
Separase, putative.
   
 
 0.913
RCOM_0799040
Serine/threonine-protein kinase, putative; Belongs to the protein kinase superfamily.
   
 0.910
RCOM_1612520
Serine/threonine-protein kinase, putative.
   
 0.908
RCOM_0838250
Meiotic checkpoint regulator cut4, putative.
    
 0.903
RCOM_0332780
Ubiquitin-conjugating enzyme E2 C, putative; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.902
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.