STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1033990Homomeric Acetyl-CoA Carboxylase (Hom-ACCase). (2259 aa)    
Predicted Functional Partners:
RCOM_1403260
Malonyl-CoA: ACP Acyltransferase (MCAAT).
  
 
 0.983
RCOM_1657380
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
0.979
RCOM_0860740
Acetyl-CoA acetyltransferase, mitochondrial, putative; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.972
RCOM_0690990
Acetyl-CoA acetyltransferase, mitochondrial, putative.
    
 0.972
KASIII
Plastid 3-keto-acyl-ACP synthase III.
  
 
 0.968
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
   
 0.967
RCOM_0903560
Malonyl-CoA decarboxylase, putative.
     
 0.950
RCOM_2110210
Multidrug resistance protein mdtM, putative.
  
 0.937
RCOM_1791770
Glutamyl-tRNA(Gln) amidotransferase subunit A, putative.
  
 0.937
RCOM_1506900
Malate synthase; Belongs to the malate synthase family.
   
 
 0.922
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.