STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0913020Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (445 aa)    
Predicted Functional Partners:
RCOM_0964990
Uncharacterized protein.
  
 
   0.524
RCOM_1303620
Bcr-associated protein, bap, putative.
  
    0.523
RCOM_0377470
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.522
RCOM_1162710
GUB_WAK_bind domain-containing protein.
  
 
   0.517
RCOM_0528500
Polygalacturonase-1 non-catalytic subunit beta, putative.
  
 
 
 0.517
RCOM_1676690
Uncharacterized protein.
  
     0.514
RCOM_0283490
14 kDa proline-rich protein DC2.15, putative.
  
 
   0.514
RCOM_1056770
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.513
RCOM_2141360
Uncharacterized protein.
  
    0.513
RCOM_1578770
Uncharacterized protein.
  
 
   0.508
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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