STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0913060Aquaporin NIP1.1, putative; Belongs to the MIP/aquaporin (TC 1.A.8) family. (298 aa)    
Predicted Functional Partners:
RCOM_0559630
Amino acid binding protein, putative.
      
 0.609
RCOM_1272560
Aquaporin sip2.1, putative; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.516
RCOM_0708270
26S protease regulatory subunit, putative; Belongs to the AAA ATPase family.
  
 
 0.453
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
  
 
 0.453
RCOM_0901490
Glycerol kinase, putative.
  
 
 0.453
RCOM_0632640
Katanin p60 ATPase-containing subunit, putative.
  
 
 0.453
RCOM_1722300
26S protease regulatory subunit, putative.
  
 
 0.453
RCOM_0649850
PHD-type domain-containing protein.
  
 
 0.453
RCOM_1629040
26S protease regulatory subunit, putative; Belongs to the AAA ATPase family.
  
 
 0.453
RCOM_0297020
DNA binding protein, putative.
  
 
 0.453
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.