STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1460080Uridylate kinase, putative. (328 aa)    
Predicted Functional Partners:
RCOM_1499990
Uridylate kinase plant, putative; Belongs to the adenylate kinase family.
  
 
 0.963
RCOM_1329770
Uridylate kinase plant, putative; Belongs to the adenylate kinase family.
  
 
 0.963
RCOM_0658900
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
  
 
 0.963
RCOM_1507310
Nucleoside diphosphate kinase.
  
 
 0.959
RCOM_1692100
PH domain-containing protein.
  
 
 0.959
RCOM_0658170
Nucleoside diphosphate kinase.
  
 
 0.959
RCOM_1157550
Uracil phosphoribosyltransferase, putative.
   
 
 0.957
RCOM_1677750
Uridine kinase; Belongs to the uridine kinase family.
   
 
 0.953
RCOM_1619070
Uridine cytidine kinase I, putative.
   
 
 0.953
RCOM_1464850
Uridine cytidine kinase I, putative.
   
 
 0.953
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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