STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0900020Uncharacterized protein; Belongs to the AAA ATPase family. (307 aa)    
Predicted Functional Partners:
RCOM_0296600
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.446
RCOM_1925940
Hypoxanthine-guanine phosphoribosyltransferase, putative.
  
  
 0.446
RCOM_1171660
Prohibitin.
   
 0.437
RCOM_1536870
Stomatin-1, putative.
   
 0.422
RCOM_1889130
Erythrocyte band 7 integral membrane protein, putative.
   
 0.422
RCOM_2029520
Erythrocyte band 7 integral membrane protein, putative.
   
 0.422
RCOM_1679310
Prohibitin.
   
 0.421
RCOM_1499240
Protein PPLZ12, putative.
   
 0.420
RCOM_0854790
PHB domain-containing protein.
   
 0.420
RCOM_1024120
Carboxyl-terminal-processing protease, putative.
   
 0.420
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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