STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1173280Phospholipid-transporting atpase, putative. (138 aa)    
Predicted Functional Partners:
RCOM_1426850
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.607
RCOM_1104330
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.607
RCOM_1602950
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.607
RCOM_0229930
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.607
RCOM_1173290
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
 
      0.543
RCOM_0727700
Eukaryotic translation initiation factor 2 gamma subunit, putative.
      
 0.522
RCOM_1173270
Phospholipid-transporting atpase, putative.
 
     0.490
RCOM_0837810
Vesicle transport V-snare protein vti1a, putative.
      
 0.402
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.